Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
1700028J19RikA0A0U1RP08 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
1700028J19RikA0A0U1RP08 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
1700028J19RikA0A0U1RP08 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm17807-201ENSMUST00000186869 298 ntBASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
1700028J19RikA0A0U1RP08 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
1700028J19RikA0A0U1RP08 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
1700028J19RikA0A0U1RP08 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms