Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav7n-4A0A075B620 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav7n-4A0A075B620 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Gm12933-201ENSMUST00000120203 872 ntBASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Gm29707-201ENSMUST00000196325 491 ntBASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav7n-4A0A075B620 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav7n-4A0A075B620 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms