Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav4n-4A0A075B615 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav4n-4A0A075B615 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Gm5049-201ENSMUST00000195878 1590 ntBASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Gm30437-201ENSMUST00000206086 1201 ntBASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav4n-4A0A075B615 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav4n-4A0A075B615 Gm18115-201ENSMUST00000221209 621 ntBASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms