Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Gm18889-201ENSMUST00000174284 929 ntBASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Gm43474-201ENSMUST00000196415 774 ntBASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rrp8Q9DB85 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rrp8Q9DB85 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Gm25948-201ENSMUST00000175334 112 ntBASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Gm43125-201ENSMUST00000201724 730 ntBASIC15.11■□□□□ 0.01
Rrp8Q9DB85 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rrp8Q9DB85 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Gm20949-201ENSMUST00000206478 952 ntBASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.1■□□□□ 0.01
Rrp8Q9DB85 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rrp8Q9DB85 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms