Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Gm37025-201ENSMUST00000195159 829 ntBASIC9.77□□□□□ -0.85
Cystm1Q8K353 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC9.77□□□□□ -0.85
Cystm1Q8K353 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Cystm1Q8K353 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gm24841-201ENSMUST00000158676 357 ntBASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gm6659-201ENSMUST00000174752 547 ntBASIC9.76□□□□□ -0.85
Cystm1Q8K353 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gm18032-201ENSMUST00000222541 538 ntBASIC9.76□□□□□ -0.85
Cystm1Q8K353 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Cystm1Q8K353 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Gm12085-201ENSMUST00000119263 940 ntBASIC9.75□□□□□ -0.85
Cystm1Q8K353 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Gm43353-201ENSMUST00000199224 1295 ntBASIC9.75□□□□□ -0.85
Cystm1Q8K353 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Cystm1Q8K353 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms