Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm9794-201ENSMUST00000202370 423 ntBASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col16a1Q8BLX7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Syt7-205ENSMUST00000224135 1557 ntBASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Gm3365-201ENSMUST00000216296 1480 ntBASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 AC124732.1-201ENSMUST00000221551 910 ntBASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col16a1Q8BLX7 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Gm24694-201ENSMUST00000180054 110 ntBASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Gm27663-201ENSMUST00000184839 110 ntBASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col16a1Q8BLX7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Col16a1Q8BLX7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Col16a1Q8BLX7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Gm14127-201ENSMUST00000117906 678 ntBASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Gm27838-201ENSMUST00000184829 128 ntBASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Gm44344-201ENSMUST00000200287 129 ntBASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Col16a1Q8BLX7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col16a1Q8BLX7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms