Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim6Q8BGE7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Gm21559-201ENSMUST00000220638 855 ntBASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Gm8587-201ENSMUST00000076538 843 ntBASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim6Q8BGE7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim6Q8BGE7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Gm11355-201ENSMUST00000121120 306 ntBASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.47■□□□□ 0.23
Trim6Q8BGE7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim6Q8BGE7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim6Q8BGE7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trim6Q8BGE7 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim6Q8BGE7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim6Q8BGE7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trim6Q8BGE7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Trim6Q8BGE7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim6Q8BGE7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms