Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pif1Q80SX8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pif1Q80SX8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pif1Q80SX8 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.27□□□□□ -0.12
Pif1Q80SX8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Pif1Q80SX8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Gm15920-201ENSMUST00000118998 402 ntBASIC14.27□□□□□ -0.13
Pif1Q80SX8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Gm6257-201ENSMUST00000163864 910 ntBASIC14.27□□□□□ -0.13
Pif1Q80SX8 Gm18489-201ENSMUST00000172565 551 ntBASIC14.27□□□□□ -0.13
Pif1Q80SX8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.27□□□□□ -0.13
Pif1Q80SX8 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pif1Q80SX8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.26□□□□□ -0.13
Pif1Q80SX8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pif1Q80SX8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.25□□□□□ -0.13
Pif1Q80SX8 Gm7063-201ENSMUST00000186840 981 ntBASIC14.25□□□□□ -0.13
Pif1Q80SX8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pif1Q80SX8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms