Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 AC104390.1-201ENST00000555663 520 ntBASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 KRT8P7-201ENST00000533003 1432 ntBASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RFWD3Q6PCD5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 FAM86EP-206ENST00000510506 987 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 MIR3917-201ENST00000580971 93 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AC010240.3-201ENST00000607688 395 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AC079602.3-201ENST00000623931 403 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AC099343.3-201ENST00000605834 2503 ntBASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFWD3Q6PCD5 AP000997.3-201ENST00000623333 2250 ntBASIC19.14■□□□□ 0.66
RFWD3Q6PCD5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFWD3Q6PCD5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.14■□□□□ 0.66
RFWD3Q6PCD5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RFWD3Q6PCD5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 AC135050.7-201ENST00000624508 2218 ntBASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFWD3Q6PCD5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 HBZP1-201ENST00000354915 429 ntBASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 SPDYE13P-201ENST00000445314 798 ntBASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 AL121956.5-201ENST00000625261 221 ntBASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RFWD3Q6PCD5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms