Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm12134-201ENSMUST00000122109 520 ntBASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gm29707-201ENSMUST00000196325 491 ntBASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Shisa3Q3UPR0 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Shisa3Q3UPR0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Gm8258-201ENSMUST00000055593 1449 ntBASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Shisa3Q3UPR0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Shisa3Q3UPR0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms