Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC9.17□□□□□ -0.94
Rps28P62858 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
Rps28P62858 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Gm23547-201ENSMUST00000158210 271 ntBASIC9.17□□□□□ -0.94
Rps28P62858 AC124549.3-201ENSMUST00000225541 367 ntBASIC9.17□□□□□ -0.94
Rps28P62858 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Gm2420-202ENSMUST00000202224 2249 ntBASIC9.17□□□□□ -0.94
Rps28P62858 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC9.16□□□□□ -0.94
Rps28P62858 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.16□□□□□ -0.94
Rps28P62858 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Rps28P62858 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Rps28P62858 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Rps28P62858 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.15□□□□□ -0.94
Rps28P62858 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.15□□□□□ -0.94
Rps28P62858 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Rps28P62858 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.94
Rps28P62858 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC9.15□□□□□ -0.94
Rps28P62858 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rps28P62858 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Gm20554-201ENSMUST00000177421 2352 ntBASIC9.15□□□□□ -0.95
Rps28P62858 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Rps28P62858 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.95
Rps28P62858 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.95
Rps28P62858 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC9.15□□□□□ -0.95
Rps28P62858 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Rps28P62858 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rps28P62858 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rps28P62858 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms