Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Gm9987-201ENSMUST00000069768 567 ntBASIC11.12□□□□□ -0.63
Ube2d3P61079 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.12□□□□□ -0.63
Ube2d3P61079 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.12□□□□□ -0.63
Ube2d3P61079 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ube2d3P61079 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ube2d3P61079 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.11□□□□□ -0.63
Ube2d3P61079 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC11.11□□□□□ -0.63
Ube2d3P61079 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Gm5587-201ENSMUST00000206270 674 ntBASIC11.11□□□□□ -0.63
Ube2d3P61079 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ube2d3P61079 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.11□□□□□ -0.63
Ube2d3P61079 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ube2d3P61079 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.1□□□□□ -0.63
Ube2d3P61079 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gm6257-201ENSMUST00000163864 910 ntBASIC11.1□□□□□ -0.63
Ube2d3P61079 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ube2d3P61079 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ube2d3P61079 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ube2d3P61079 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube2d3P61079 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms