Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sf3b6P59708 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b6P59708 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sf3b6P59708 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Sf3b6P59708 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.77□□□□□ -0.21
Sf3b6P59708 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Sf3b6P59708 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.77□□□□□ -0.21
Sf3b6P59708 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.77□□□□□ -0.21
Sf3b6P59708 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sf3b6P59708 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Sf3b6P59708 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.76□□□□□ -0.21
Sf3b6P59708 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm26039-201ENSMUST00000158152 144 ntBASIC13.76□□□□□ -0.21
Sf3b6P59708 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Mir1668-201ENSMUST00000184114 107 ntBASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm44430-201ENSMUST00000203376 995 ntBASIC13.76□□□□□ -0.21
Sf3b6P59708 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.76□□□□□ -0.21
Sf3b6P59708 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sf3b6P59708 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sf3b6P59708 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.75□□□□□ -0.21
Sf3b6P59708 Gm18032-201ENSMUST00000222541 538 ntBASIC13.75□□□□□ -0.21
Sf3b6P59708 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.75□□□□□ -0.21
Sf3b6P59708 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sf3b6P59708 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.74□□□□□ -0.21
Sf3b6P59708 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sf3b6P59708 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms