Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Nedd8P29595 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.39□□□□□ -0.11
Nedd8P29595 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.38□□□□□ -0.11
Nedd8P29595 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.38□□□□□ -0.11
Nedd8P29595 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.38□□□□□ -0.11
Nedd8P29595 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Nedd8P29595 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Nedd8P29595 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nedd8P29595 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nedd8P29595 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Nedd8P29595 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nedd8P29595 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nedd8P29595 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Nedd8P29595 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.37□□□□□ -0.11
Nedd8P29595 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nedd8P29595 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Nedd8P29595 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.36□□□□□ -0.11
Nedd8P29595 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.36□□□□□ -0.11
Nedd8P29595 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Gm13186-201ENSMUST00000118031 316 ntBASIC14.36□□□□□ -0.11
Nedd8P29595 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.36□□□□□ -0.11
Nedd8P29595 Mir5133-201ENSMUST00000174955 77 ntBASIC14.36□□□□□ -0.11
Nedd8P29595 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nedd8P29595 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.36□□□□□ -0.11
Nedd8P29595 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Nedd8P29595 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nedd8P29595 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms