Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Gm10139O88245 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm10139O88245 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Gm10139O88245 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 AA414768-201ENSMUST00000121924 1257 ntBASIC9.44□□□□□ -0.9
Gm10139O88245 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm10139O88245 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm10139O88245 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm10139O88245 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm10139O88245 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.44□□□□□ -0.9
Gm10139O88245 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10139O88245 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Gm10139O88245 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Gm10139O88245 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm10139O88245 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm10139O88245 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm10139O88245 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10139O88245 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm10139O88245 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm5357-201ENSMUST00000212720 1924 ntBASIC9.43□□□□□ -0.9
Gm10139O88245 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm10139O88245 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC9.43□□□□□ -0.9
Gm10139O88245 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Gm10139O88245 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm6728-201ENSMUST00000178117 1065 ntBASIC9.43□□□□□ -0.9
Gm10139O88245 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Gm10139O88245 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm10139O88245 AC159093.1-201ENSMUST00000227779 380 ntBASIC9.43□□□□□ -0.9
Gm10139O88245 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Gm43352-201ENSMUST00000196419 3065 ntBASIC9.43□□□□□ -0.9
Gm10139O88245 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm10139O88245 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms