Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra3O35118 Gm45251-201ENSMUST00000209486 1465 ntBASIC13.4□□□□□ -0.26
Gfra3O35118 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra3O35118 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gfra3O35118 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Gfra3O35118 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gfra3O35118 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.4□□□□□ -0.27
Gfra3O35118 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gfra3O35118 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gfra3O35118 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Gfra3O35118 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Gfra3O35118 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.39□□□□□ -0.27
Gfra3O35118 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Gfra3O35118 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Gfra3O35118 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.39□□□□□ -0.27
Gfra3O35118 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.39□□□□□ -0.27
Gfra3O35118 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.39□□□□□ -0.27
Gfra3O35118 Gm37153-201ENSMUST00000193637 231 ntBASIC13.39□□□□□ -0.27
Gfra3O35118 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gfra3O35118 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.39□□□□□ -0.27
Gfra3O35118 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gfra3O35118 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.38□□□□□ -0.27
Gfra3O35118 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gfra3O35118 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.38□□□□□ -0.27
Gfra3O35118 Gm11764-201ENSMUST00000120221 623 ntBASIC13.38□□□□□ -0.27
Gfra3O35118 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.38□□□□□ -0.27
Gfra3O35118 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.38□□□□□ -0.27
Gfra3O35118 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.38□□□□□ -0.27
Gfra3O35118 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.38□□□□□ -0.27
Gfra3O35118 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.38□□□□□ -0.27
Gfra3O35118 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.38□□□□□ -0.27
Gfra3O35118 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Gfra3O35118 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.38□□□□□ -0.27
Gfra3O35118 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gfra3O35118 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Gfra3O35118 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gfra3O35118 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms