Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav13d-3J3QMG8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Gm24589-201ENSMUST00000116692 94 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Gm14722-201ENSMUST00000118943 689 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav13d-3J3QMG8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm15358-201ENSMUST00000119249 520 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm11780-201ENSMUST00000136880 516 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm4535-201ENSMUST00000182274 558 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm17971-201ENSMUST00000190239 806 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm10355-201ENSMUST00000097146 517 ntBASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav13d-3J3QMG8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav13d-3J3QMG8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav13d-3J3QMG8 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms