Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccnb1ip1D3Z3K2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccnb1ip1D3Z3K2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.04□□□□□ -0.16
Ccnb1ip1D3Z3K2 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccnb1ip1D3Z3K2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccnb1ip1D3Z3K2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms