Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.01□□□□□ -0.49
Trav16A0A075B653 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.01□□□□□ -0.49
Trav16A0A075B653 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav16A0A075B653 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12□□□□□ -0.49
Trav16A0A075B653 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12□□□□□ -0.49
Trav16A0A075B653 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12□□□□□ -0.49
Trav16A0A075B653 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Trav16A0A075B653 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12□□□□□ -0.49
Trav16A0A075B653 Slc35b2-207ENSMUST00000226086 850 ntBASIC12□□□□□ -0.49
Trav16A0A075B653 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav16A0A075B653 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12□□□□□ -0.49
Trav16A0A075B653 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav16A0A075B653 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.99□□□□□ -0.49
Trav16A0A075B653 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.99□□□□□ -0.49
Trav16A0A075B653 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms