Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Dancr-204ENSMUST00000132389 2347 ntBASIC16.84■□□□□ 0.29
Nr1h3Q9Z0Y9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.83■□□□□ 0.29
Nr1h3Q9Z0Y9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Nr1h3Q9Z0Y9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm9682-201ENSMUST00000197505 556 ntBASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nr1h3Q9Z0Y9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nr1h3Q9Z0Y9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm11025-201ENSMUST00000140773 466 ntBASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nr1h3Q9Z0Y9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms