Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Col13a1Q9R1N9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm11764-201ENSMUST00000120221 623 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm44335-201ENSMUST00000196879 141 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm44297-201ENSMUST00000198304 141 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm44346-201ENSMUST00000198851 141 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col13a1Q9R1N9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm4899-201ENSMUST00000178708 719 ntBASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.18□□□□□ -0.3
Col13a1Q9R1N9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.17□□□□□ -0.3
Col13a1Q9R1N9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms