Protein–RNA interactions for Protein: Q9ER88

Dap3, 28S ribosomal protein S29, mitochondrial, mousemouse

Known RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dap3Q9ER88 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Dap3Q9ER88 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.29□□□□□ -0.12
Dap3Q9ER88 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Dap3Q9ER88 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Gm18959-201ENSMUST00000208954 655 ntBASIC14.29□□□□□ -0.12
Dap3Q9ER88 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.29□□□□□ -0.12
Dap3Q9ER88 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Dap3Q9ER88 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.28□□□□□ -0.12
Dap3Q9ER88 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Gm26039-201ENSMUST00000158152 144 ntBASIC14.28□□□□□ -0.12
Dap3Q9ER88 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.28□□□□□ -0.12
Dap3Q9ER88 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.28□□□□□ -0.12
Dap3Q9ER88 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.28□□□□□ -0.12
Dap3Q9ER88 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Dap3Q9ER88 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.27□□□□□ -0.12
Dap3Q9ER88 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.27□□□□□ -0.12
Dap3Q9ER88 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Dap3Q9ER88 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms