Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Alms1Q8K4E0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Gm5866-201ENSMUST00000177881 973 ntBASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.11■□□□□ 0.01
Alms1Q8K4E0 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Alms1Q8K4E0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Alms1Q8K4E0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms