Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.07■□□□□ 0
Rdh1Q8CGV4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Rdh1Q8CGV4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.06■□□□□ 0
Rdh1Q8CGV4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.06■□□□□ 0
Rdh1Q8CGV4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rdh1Q8CGV4 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.06■□□□□ 0
Rdh1Q8CGV4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.05■□□□□ 0
Rdh1Q8CGV4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Rdh1Q8CGV4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh1Q8CGV4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh1Q8CGV4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh1Q8CGV4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Rdh1Q8CGV4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Gm14722-201ENSMUST00000118943 689 ntBASIC15.05■□□□□ -0
Rdh1Q8CGV4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Gm14822-201ENSMUST00000122247 291 ntBASIC15.05■□□□□ -0
Rdh1Q8CGV4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Rdh1Q8CGV4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Gm25911-201ENSMUST00000157621 56 ntBASIC15.04■□□□□ -0
Rdh1Q8CGV4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rdh1Q8CGV4 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.03■□□□□ -0
Rdh1Q8CGV4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Gm24513-201ENSMUST00000174964 138 ntBASIC15.03■□□□□ -0
Rdh1Q8CGV4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Rdh1Q8CGV4 Gm27397-201ENSMUST00000184997 107 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms