Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh19Q80TF3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdh19Q80TF3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdh19Q80TF3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh19Q80TF3 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Pcdh19Q80TF3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh19Q80TF3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdh19Q80TF3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.2■□□□□ 0.02
Pcdh19Q80TF3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms