Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm12896-201ENSMUST00000118430 226 ntBASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav3-3Q5R1C3 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Gm4974-201ENSMUST00000209974 875 ntBASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Trav3-3Q5R1C3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gm11249-201ENSMUST00000117071 859 ntBASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gm18025-201ENSMUST00000221733 862 ntBASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav3-3Q5R1C3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms