Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 AC157650.3-201ENSMUST00000225058 1476 ntBASIC9.2□□□□□ -0.94
Rps28P62858 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.2□□□□□ -0.94
Rps28P62858 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Rps28P62858 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Rps28P62858 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Gm36967-201ENSMUST00000193814 266 ntBASIC9.19□□□□□ -0.94
Rps28P62858 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC9.19□□□□□ -0.94
Rps28P62858 AC107711.5-202ENSMUST00000226429 702 ntBASIC9.19□□□□□ -0.94
Rps28P62858 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Rps28P62858 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
Rps28P62858 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Rps28P62858 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC9.19□□□□□ -0.94
Rps28P62858 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC9.19□□□□□ -0.94
Rps28P62858 AC162938.1-201ENSMUST00000213140 2323 ntBASIC9.19□□□□□ -0.94
Rps28P62858 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Rps28P62858 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC9.18□□□□□ -0.94
Rps28P62858 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Rps28P62858 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.18□□□□□ -0.94
Rps28P62858 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.18□□□□□ -0.94
Rps28P62858 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Rps28P62858 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rps28P62858 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Rps28P62858 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Rps28P62858 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Rps28P62858 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Rps28P62858 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Rps28P62858 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.17□□□□□ -0.94
Rps28P62858 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Rps28P62858 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Rps28P62858 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms