Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Il3ra-202ENSMUST00000223589 738 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nedd8P29595 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Nedd8P29595 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Nedd8P29595 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nedd8P29595 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.42□□□□□ -0.1
Nedd8P29595 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nedd8P29595 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.41□□□□□ -0.1
Nedd8P29595 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.41□□□□□ -0.1
Nedd8P29595 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nedd8P29595 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.41□□□□□ -0.1
Nedd8P29595 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.4□□□□□ -0.1
Nedd8P29595 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Nedd8P29595 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Nedd8P29595 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Nedd8P29595 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nedd8P29595 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nedd8P29595 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nedd8P29595 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.39□□□□□ -0.11
Nedd8P29595 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.39□□□□□ -0.11
Nedd8P29595 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.39□□□□□ -0.11
Nedd8P29595 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Gm12896-201ENSMUST00000118430 226 ntBASIC14.39□□□□□ -0.11
Nedd8P29595 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.39□□□□□ -0.11
Nedd8P29595 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nedd8P29595 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms