Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Mir770-201ENSMUST00000103252 94 ntBASIC12.29□□□□□ -0.44
P01788 Gm15565-201ENSMUST00000118890 427 ntBASIC12.29□□□□□ -0.44
P01788 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.29□□□□□ -0.44
P01788 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.29□□□□□ -0.44
P01788 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P01788 Mir6404-201ENSMUST00000183699 94 ntBASIC12.29□□□□□ -0.44
P01788 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.29□□□□□ -0.44
P01788 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.29□□□□□ -0.44
P01788 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.29□□□□□ -0.44
P01788 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P01788 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.28□□□□□ -0.44
P01788 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P01788 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
P01788 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P01788 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.28□□□□□ -0.44
P01788 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.28□□□□□ -0.44
P01788 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
P01788 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.28□□□□□ -0.44
P01788 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Gm6257-201ENSMUST00000163864 910 ntBASIC12.28□□□□□ -0.44
P01788 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.28□□□□□ -0.44
P01788 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.28□□□□□ -0.44
P01788 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
P01788 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.28□□□□□ -0.44
P01788 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.28□□□□□ -0.44
P01788 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P01788 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.28□□□□□ -0.44
P01788 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P01788 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
P01788 Efs-202ENSMUST00000227037 2540 ntBASIC12.28□□□□□ -0.44
P01788 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.27□□□□□ -0.44
P01788 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
P01788 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.27□□□□□ -0.44
P01788 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
P01788 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
P01788 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P01788 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P01788 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.27□□□□□ -0.45
P01788 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
P01788 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
P01788 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P01788 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
P01788 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
P01788 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms