Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sigmar1O55242 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Sigmar1O55242 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sigmar1O55242 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sigmar1O55242 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sigmar1O55242 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sigmar1O55242 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Sigmar1O55242 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sigmar1O55242 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sigmar1O55242 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Sigmar1O55242 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sigmar1O55242 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sigmar1O55242 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sigmar1O55242 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.77□□□□□ -0.69
Sigmar1O55242 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Sigmar1O55242 AC131586.2-201ENSMUST00000228370 1512 ntBASIC10.77□□□□□ -0.69
Sigmar1O55242 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Sigmar1O55242 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.77□□□□□ -0.69
Sigmar1O55242 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sigmar1O55242 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.76□□□□□ -0.69
Sigmar1O55242 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gm13146-201ENSMUST00000118508 780 ntBASIC10.76□□□□□ -0.69
Sigmar1O55242 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gm8493-201ENSMUST00000196881 489 ntBASIC10.76□□□□□ -0.69
Sigmar1O55242 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Gm40848-201ENSMUST00000221998 324 ntBASIC10.76□□□□□ -0.69
Sigmar1O55242 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Sigmar1O55242 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC10.76□□□□□ -0.69
Sigmar1O55242 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Sigmar1O55242 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms