Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Fbxl12-205ENSMUST00000140702 1555 ntBASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Gm27405-201ENSMUST00000184201 112 ntBASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav7n-4A0A075B620 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7n-4A0A075B620 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7n-4A0A075B620 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Gm18666-201ENSMUST00000190039 958 ntBASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7n-4A0A075B620 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms