Protein–RNA interactions for Protein: Q9Z1X0

Ccl27, C-C motif chemokine 27, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl27Q9Z1X0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccl27Q9Z1X0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Ccl27Q9Z1X0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccl27Q9Z1X0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl27Q9Z1X0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccl27Q9Z1X0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl27Q9Z1X0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl27Q9Z1X0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.13■□□□□ 0.97
Ccl27Q9Z1X0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.13■□□□□ 0.97
Ccl27Q9Z1X0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl27Q9Z1X0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl27Q9Z1X0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.12■□□□□ 0.97
Ccl27Q9Z1X0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl27Q9Z1X0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl27Q9Z1X0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl27Q9Z1X0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl27Q9Z1X0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl27Q9Z1X0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Ccl27Q9Z1X0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.1■□□□□ 0.97
Ccl27Q9Z1X0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
Ccl27Q9Z1X0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.08■□□□□ 0.97
Ccl27Q9Z1X0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccl27Q9Z1X0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl27Q9Z1X0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccl27Q9Z1X0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccl27Q9Z1X0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl27Q9Z1X0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Ccl27Q9Z1X0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl27Q9Z1X0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl27Q9Z1X0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl27Q9Z1X0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl27Q9Z1X0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl27Q9Z1X0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl27Q9Z1X0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Ccl27Q9Z1X0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl27Q9Z1X0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl27Q9Z1X0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl27Q9Z1X0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ccl27Q9Z1X0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl27Q9Z1X0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl27Q9Z1X0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl27Q9Z1X0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccl27Q9Z1X0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Gm42699-201ENSMUST00000198104 1657 ntBASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccl27Q9Z1X0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccl27Q9Z1X0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccl27Q9Z1X0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccl27Q9Z1X0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccl27Q9Z1X0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ccl27Q9Z1X0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccl27Q9Z1X0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccl27Q9Z1X0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccl27Q9Z1X0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl27Q9Z1X0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms