Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Htra1Q9R118 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Htra1Q9R118 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.81■□□□□ 0.92
Htra1Q9R118 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Htra1Q9R118 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Htra1Q9R118 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.81■□□□□ 0.92
Htra1Q9R118 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Htra1Q9R118 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Htra1Q9R118 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Htra1Q9R118 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Htra1Q9R118 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.8■□□□□ 0.92
Htra1Q9R118 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Htra1Q9R118 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Htra1Q9R118 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Htra1Q9R118 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htra1Q9R118 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.79■□□□□ 0.92
Htra1Q9R118 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htra1Q9R118 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Htra1Q9R118 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Htra1Q9R118 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Htra1Q9R118 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Htra1Q9R118 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Htra1Q9R118 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Htra1Q9R118 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Htra1Q9R118 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Htra1Q9R118 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Htra1Q9R118 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Htra1Q9R118 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Htra1Q9R118 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Htra1Q9R118 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Htra1Q9R118 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Htra1Q9R118 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Htra1Q9R118 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Htra1Q9R118 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htra1Q9R118 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htra1Q9R118 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Htra1Q9R118 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Htra1Q9R118 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.74■□□□□ 0.91
Htra1Q9R118 Gm30023-201ENSMUST00000197970 889 ntBASIC20.74■□□□□ 0.91
Htra1Q9R118 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Htra1Q9R118 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Htra1Q9R118 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Htra1Q9R118 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.73■□□□□ 0.91
Htra1Q9R118 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.73■□□□□ 0.91
Htra1Q9R118 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Htra1Q9R118 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Htra1Q9R118 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Htra1Q9R118 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Htra1Q9R118 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Htra1Q9R118 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Htra1Q9R118 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.71■□□□□ 0.91
Htra1Q9R118 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Htra1Q9R118 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Htra1Q9R118 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Htra1Q9R118 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htra1Q9R118 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Htra1Q9R118 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Htra1Q9R118 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Htra1Q9R118 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Htra1Q9R118 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.68■□□□□ 0.9
Htra1Q9R118 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Htra1Q9R118 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Htra1Q9R118 Nkain2-201ENSMUST00000092602 558 ntBASIC20.67■□□□□ 0.9
Htra1Q9R118 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Htra1Q9R118 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Htra1Q9R118 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Htra1Q9R118 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Htra1Q9R118 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Htra1Q9R118 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Htra1Q9R118 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Htra1Q9R118 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Htra1Q9R118 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Htra1Q9R118 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms