Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nubp2Q9R061 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nubp2Q9R061 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nubp2Q9R061 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Nubp2Q9R061 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Nubp2Q9R061 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nubp2Q9R061 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nubp2Q9R061 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Gm6311-201ENSMUST00000073790 878 ntBASIC19.94■□□□□ 0.78
Nubp2Q9R061 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nubp2Q9R061 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nubp2Q9R061 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nubp2Q9R061 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nubp2Q9R061 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.92■□□□□ 0.78
Nubp2Q9R061 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nubp2Q9R061 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.92■□□□□ 0.78
Nubp2Q9R061 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.92■□□□□ 0.78
Nubp2Q9R061 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Nubp2Q9R061 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Nubp2Q9R061 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Nubp2Q9R061 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nubp2Q9R061 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nubp2Q9R061 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nubp2Q9R061 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.89■□□□□ 0.77
Nubp2Q9R061 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nubp2Q9R061 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Nubp2Q9R061 Gm37136-201ENSMUST00000194368 194 ntBASIC19.89■□□□□ 0.77
Nubp2Q9R061 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nubp2Q9R061 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.88■□□□□ 0.77
Nubp2Q9R061 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nubp2Q9R061 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nubp2Q9R061 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Nubp2Q9R061 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nubp2Q9R061 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nubp2Q9R061 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Nubp2Q9R061 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nubp2Q9R061 Gm4799-201ENSMUST00000095396 657 ntBASIC19.87■□□□□ 0.77
Nubp2Q9R061 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nubp2Q9R061 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nubp2Q9R061 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nubp2Q9R061 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.86■□□□□ 0.77
Nubp2Q9R061 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nubp2Q9R061 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.85■□□□□ 0.77
Nubp2Q9R061 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Nubp2Q9R061 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nubp2Q9R061 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.85■□□□□ 0.77
Nubp2Q9R061 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nubp2Q9R061 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nubp2Q9R061 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nubp2Q9R061 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nubp2Q9R061 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.84■□□□□ 0.77
Nubp2Q9R061 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nubp2Q9R061 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nubp2Q9R061 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nubp2Q9R061 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.82■□□□□ 0.76
Nubp2Q9R061 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.82■□□□□ 0.76
Nubp2Q9R061 Mir6538-201ENSMUST00000183713 110 ntBASIC19.82■□□□□ 0.76
Nubp2Q9R061 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.82■□□□□ 0.76
Nubp2Q9R061 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Gm11175-201ENSMUST00000116172 543 ntBASIC19.81■□□□□ 0.76
Nubp2Q9R061 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nubp2Q9R061 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Nubp2Q9R061 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nubp2Q9R061 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nubp2Q9R061 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nubp2Q9R061 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.78■□□□□ 0.76
Nubp2Q9R061 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nubp2Q9R061 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.78■□□□□ 0.76
Nubp2Q9R061 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nubp2Q9R061 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nubp2Q9R061 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nubp2Q9R061 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nubp2Q9R061 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nubp2Q9R061 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms