Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Prg4Q9JM99 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.87■□□□□ 0.93
Prg4Q9JM99 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prg4Q9JM99 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prg4Q9JM99 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Prg4Q9JM99 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prg4Q9JM99 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prg4Q9JM99 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.86■□□□□ 0.93
Prg4Q9JM99 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Prg4Q9JM99 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Prg4Q9JM99 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Prg4Q9JM99 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Prg4Q9JM99 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Prg4Q9JM99 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Gm44428-201ENSMUST00000204474 874 ntBASIC20.82■□□□□ 0.92
Prg4Q9JM99 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Prg4Q9JM99 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Prg4Q9JM99 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Prg4Q9JM99 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.8■□□□□ 0.92
Prg4Q9JM99 Cap2-205ENSMUST00000225824 1634 ntBASIC20.8■□□□□ 0.92
Prg4Q9JM99 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Prg4Q9JM99 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.8■□□□□ 0.92
Prg4Q9JM99 Gm12366-201ENSMUST00000121722 873 ntBASIC20.8■□□□□ 0.92
Prg4Q9JM99 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.8■□□□□ 0.92
Prg4Q9JM99 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.8■□□□□ 0.92
Prg4Q9JM99 Gm5786-201ENSMUST00000085368 882 ntBASIC20.8■□□□□ 0.92
Prg4Q9JM99 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Prg4Q9JM99 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Prg4Q9JM99 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.79■□□□□ 0.92
Prg4Q9JM99 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.79■□□□□ 0.92
Prg4Q9JM99 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Prg4Q9JM99 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Prg4Q9JM99 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.78■□□□□ 0.92
Prg4Q9JM99 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Prg4Q9JM99 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prg4Q9JM99 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prg4Q9JM99 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Prg4Q9JM99 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.77■□□□□ 0.92
Prg4Q9JM99 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.77■□□□□ 0.92
Prg4Q9JM99 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Gm14523-201ENSMUST00000117260 558 ntBASIC20.76■□□□□ 0.91
Prg4Q9JM99 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Prg4Q9JM99 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Prg4Q9JM99 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Prg4Q9JM99 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prg4Q9JM99 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prg4Q9JM99 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Prg4Q9JM99 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prg4Q9JM99 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prg4Q9JM99 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.73■□□□□ 0.91
Prg4Q9JM99 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Prg4Q9JM99 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prg4Q9JM99 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.72■□□□□ 0.91
Prg4Q9JM99 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prg4Q9JM99 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Prg4Q9JM99 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.7■□□□□ 0.9
Prg4Q9JM99 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prg4Q9JM99 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms