Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h8Q9JJ48 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Zc3h8Q9JJ48 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Zc3h8Q9JJ48 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h8Q9JJ48 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h8Q9JJ48 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h8Q9JJ48 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Zc3h8Q9JJ48 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h8Q9JJ48 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3h8Q9JJ48 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.1■□□□□ 0.97
Zc3h8Q9JJ48 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Zc3h8Q9JJ48 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h8Q9JJ48 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h8Q9JJ48 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3h8Q9JJ48 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3h8Q9JJ48 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.08■□□□□ 0.97
Zc3h8Q9JJ48 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
Zc3h8Q9JJ48 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3h8Q9JJ48 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3h8Q9JJ48 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3h8Q9JJ48 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3h8Q9JJ48 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3h8Q9JJ48 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h8Q9JJ48 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.05■□□□□ 0.96
Zc3h8Q9JJ48 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Zc3h8Q9JJ48 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.05■□□□□ 0.96
Zc3h8Q9JJ48 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3h8Q9JJ48 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Zc3h8Q9JJ48 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Zc3h8Q9JJ48 Cap2-205ENSMUST00000225824 1634 ntBASIC21.02■□□□□ 0.96
Zc3h8Q9JJ48 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
Zc3h8Q9JJ48 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Zc3h8Q9JJ48 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Zc3h8Q9JJ48 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Zc3h8Q9JJ48 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Gm27502-201ENSMUST00000183495 199 ntBASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3h8Q9JJ48 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Gm12366-201ENSMUST00000121722 873 ntBASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Gm5786-201ENSMUST00000085368 882 ntBASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3h8Q9JJ48 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.97■□□□□ 0.95
Zc3h8Q9JJ48 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.96■□□□□ 0.95
Zc3h8Q9JJ48 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3h8Q9JJ48 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3h8Q9JJ48 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3h8Q9JJ48 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3h8Q9JJ48 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms