Protein–RNA interactions for Protein: Q9ESN6

Trim2, Tripartite motif-containing protein 2, mousemouse

Known RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim2Q9ESN6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim2Q9ESN6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim2Q9ESN6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim2Q9ESN6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim2Q9ESN6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim2Q9ESN6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.83■□□□□ 0.93
Trim2Q9ESN6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim2Q9ESN6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.82■□□□□ 0.92
Trim2Q9ESN6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim2Q9ESN6 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.8■□□□□ 0.92
Trim2Q9ESN6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim2Q9ESN6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim2Q9ESN6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim2Q9ESN6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim2Q9ESN6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim2Q9ESN6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Gm7432-201ENSMUST00000210343 879 ntBASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim2Q9ESN6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.77■□□□□ 0.92
Trim2Q9ESN6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim2Q9ESN6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim2Q9ESN6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim2Q9ESN6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trim2Q9ESN6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.75■□□□□ 0.91
Trim2Q9ESN6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim2Q9ESN6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Trim2Q9ESN6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim2Q9ESN6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim2Q9ESN6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim2Q9ESN6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim2Q9ESN6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim2Q9ESN6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Trim2Q9ESN6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim2Q9ESN6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim2Q9ESN6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim2Q9ESN6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim2Q9ESN6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim2Q9ESN6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim2Q9ESN6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim2Q9ESN6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim2Q9ESN6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Trim2Q9ESN6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Trim2Q9ESN6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim2Q9ESN6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim2Q9ESN6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim2Q9ESN6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Gm4799-201ENSMUST00000095396 657 ntBASIC20.66■□□□□ 0.9
Trim2Q9ESN6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim2Q9ESN6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim2Q9ESN6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim2Q9ESN6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim2Q9ESN6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim2Q9ESN6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim2Q9ESN6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms