Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtp4Q9ER80 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.23■□□□□ 0.99
Rtp4Q9ER80 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.23■□□□□ 0.99
Rtp4Q9ER80 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtp4Q9ER80 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtp4Q9ER80 Gm45364-201ENSMUST00000210883 159 ntBASIC21.22■□□□□ 0.99
Rtp4Q9ER80 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rtp4Q9ER80 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rtp4Q9ER80 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtp4Q9ER80 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtp4Q9ER80 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtp4Q9ER80 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rtp4Q9ER80 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rtp4Q9ER80 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rtp4Q9ER80 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
Rtp4Q9ER80 Gm9806-201ENSMUST00000051080 552 ntBASIC21.2■□□□□ 0.98
Rtp4Q9ER80 Gm16437-201ENSMUST00000025669 507 ntBASIC21.19■□□□□ 0.98
Rtp4Q9ER80 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtp4Q9ER80 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rtp4Q9ER80 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rtp4Q9ER80 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp4Q9ER80 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp4Q9ER80 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp4Q9ER80 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp4Q9ER80 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rtp4Q9ER80 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rtp4Q9ER80 Gm11687-201ENSMUST00000118911 886 ntBASIC21.17■□□□□ 0.98
Rtp4Q9ER80 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.17■□□□□ 0.98
Rtp4Q9ER80 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rtp4Q9ER80 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rtp4Q9ER80 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rtp4Q9ER80 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.14■□□□□ 0.98
Rtp4Q9ER80 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Rtp4Q9ER80 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rtp4Q9ER80 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rtp4Q9ER80 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Rtp4Q9ER80 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp4Q9ER80 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rtp4Q9ER80 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp4Q9ER80 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp4Q9ER80 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp4Q9ER80 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rtp4Q9ER80 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Rtp4Q9ER80 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp4Q9ER80 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp4Q9ER80 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.1■□□□□ 0.97
Rtp4Q9ER80 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rtp4Q9ER80 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.09■□□□□ 0.97
Rtp4Q9ER80 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtp4Q9ER80 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rtp4Q9ER80 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rtp4Q9ER80 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.08■□□□□ 0.97
Rtp4Q9ER80 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.08■□□□□ 0.97
Rtp4Q9ER80 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.08■□□□□ 0.97
Rtp4Q9ER80 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rtp4Q9ER80 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Rtp4Q9ER80 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rtp4Q9ER80 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rtp4Q9ER80 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rtp4Q9ER80 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rtp4Q9ER80 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.07■□□□□ 0.96
Rtp4Q9ER80 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rtp4Q9ER80 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.06■□□□□ 0.96
Rtp4Q9ER80 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.06■□□□□ 0.96
Rtp4Q9ER80 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
Rtp4Q9ER80 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Gm12366-201ENSMUST00000121722 873 ntBASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Gm5786-201ENSMUST00000085368 882 ntBASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rtp4Q9ER80 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rtp4Q9ER80 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtp4Q9ER80 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rtp4Q9ER80 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms