Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
5530400C23RikQ9D3I0 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.23■■□□□ 1.15
5530400C23RikQ9D3I0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
5530400C23RikQ9D3I0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
5530400C23RikQ9D3I0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.23■■□□□ 1.15
5530400C23RikQ9D3I0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
5530400C23RikQ9D3I0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
5530400C23RikQ9D3I0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
5530400C23RikQ9D3I0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
5530400C23RikQ9D3I0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
5530400C23RikQ9D3I0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
5530400C23RikQ9D3I0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Gm45364-201ENSMUST00000210883 159 ntBASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
5530400C23RikQ9D3I0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
5530400C23RikQ9D3I0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
5530400C23RikQ9D3I0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
5530400C23RikQ9D3I0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
5530400C23RikQ9D3I0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
5530400C23RikQ9D3I0 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.16■■□□□ 1.14
5530400C23RikQ9D3I0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.16■■□□□ 1.14
5530400C23RikQ9D3I0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
5530400C23RikQ9D3I0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
5530400C23RikQ9D3I0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
5530400C23RikQ9D3I0 Gm9812-201ENSMUST00000061934 968 ntBASIC22.15■■□□□ 1.14
5530400C23RikQ9D3I0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
5530400C23RikQ9D3I0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
5530400C23RikQ9D3I0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
5530400C23RikQ9D3I0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
5530400C23RikQ9D3I0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
5530400C23RikQ9D3I0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
5530400C23RikQ9D3I0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
5530400C23RikQ9D3I0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.11■■□□□ 1.13
5530400C23RikQ9D3I0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
5530400C23RikQ9D3I0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.11■■□□□ 1.13
5530400C23RikQ9D3I0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
5530400C23RikQ9D3I0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
5530400C23RikQ9D3I0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.1■■□□□ 1.13
5530400C23RikQ9D3I0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
5530400C23RikQ9D3I0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.09■■□□□ 1.13
5530400C23RikQ9D3I0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
5530400C23RikQ9D3I0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
5530400C23RikQ9D3I0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
5530400C23RikQ9D3I0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
5530400C23RikQ9D3I0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
5530400C23RikQ9D3I0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
5530400C23RikQ9D3I0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
5530400C23RikQ9D3I0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
5530400C23RikQ9D3I0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
5530400C23RikQ9D3I0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
5530400C23RikQ9D3I0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.07■■□□□ 1.12
5530400C23RikQ9D3I0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
5530400C23RikQ9D3I0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
5530400C23RikQ9D3I0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
5530400C23RikQ9D3I0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
5530400C23RikQ9D3I0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
5530400C23RikQ9D3I0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
5530400C23RikQ9D3I0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
5530400C23RikQ9D3I0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
5530400C23RikQ9D3I0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
5530400C23RikQ9D3I0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.05■■□□□ 1.12
5530400C23RikQ9D3I0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.05■■□□□ 1.12
5530400C23RikQ9D3I0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.04■■□□□ 1.12
5530400C23RikQ9D3I0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
5530400C23RikQ9D3I0 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.04■■□□□ 1.12
5530400C23RikQ9D3I0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
5530400C23RikQ9D3I0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
5530400C23RikQ9D3I0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
5530400C23RikQ9D3I0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
5530400C23RikQ9D3I0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
5530400C23RikQ9D3I0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
5530400C23RikQ9D3I0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
5530400C23RikQ9D3I0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
5530400C23RikQ9D3I0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
5530400C23RikQ9D3I0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
5530400C23RikQ9D3I0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms