Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pfdn1Q9CWM4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pfdn1Q9CWM4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Pfdn1Q9CWM4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pfdn1Q9CWM4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pfdn1Q9CWM4 Dmtn-209ENSMUST00000228295 2572 ntBASIC20■□□□□ 0.79
Pfdn1Q9CWM4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pfdn1Q9CWM4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pfdn1Q9CWM4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Pfdn1Q9CWM4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pfdn1Q9CWM4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn1Q9CWM4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn1Q9CWM4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn1Q9CWM4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pfdn1Q9CWM4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pfdn1Q9CWM4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pfdn1Q9CWM4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn1Q9CWM4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn1Q9CWM4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pfdn1Q9CWM4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pfdn1Q9CWM4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn1Q9CWM4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn1Q9CWM4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn1Q9CWM4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn1Q9CWM4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pfdn1Q9CWM4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Pfdn1Q9CWM4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pfdn1Q9CWM4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pfdn1Q9CWM4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.89■□□□□ 0.78
Pfdn1Q9CWM4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pfdn1Q9CWM4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Pfdn1Q9CWM4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn1Q9CWM4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn1Q9CWM4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pfdn1Q9CWM4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pfdn1Q9CWM4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pfdn1Q9CWM4 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.87■□□□□ 0.77
Pfdn1Q9CWM4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Pfdn1Q9CWM4 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn1Q9CWM4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pfdn1Q9CWM4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn1Q9CWM4 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn1Q9CWM4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pfdn1Q9CWM4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms