Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Gm43445-201ENSMUST00000198564 2091 ntBASIC12.22□□□□□ -0.45
Sec61bQ9CQS8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61bQ9CQS8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC12.21□□□□□ -0.45
Sec61bQ9CQS8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Sec61bQ9CQS8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Gm10420-201ENSMUST00000121713 882 ntBASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
Sec61bQ9CQS8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sec61bQ9CQS8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sec61bQ9CQS8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61bQ9CQS8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61bQ9CQS8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61bQ9CQS8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61bQ9CQS8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Gm44428-201ENSMUST00000204474 874 ntBASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61bQ9CQS8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61bQ9CQS8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61bQ9CQS8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61bQ9CQS8 Gm14121-201ENSMUST00000121441 1380 ntBASIC12.14□□□□□ -0.47
Sec61bQ9CQS8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61bQ9CQS8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Sec61bQ9CQS8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Gm5921-201ENSMUST00000075898 882 ntBASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61bQ9CQS8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Sec61bQ9CQS8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61bQ9CQS8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Sec61bQ9CQS8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms