Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1Q9CQ70 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.53■□□□□ 0.56
H2afb1Q9CQ70 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1Q9CQ70 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1Q9CQ70 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb1Q9CQ70 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb1Q9CQ70 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1Q9CQ70 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
H2afb1Q9CQ70 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1Q9CQ70 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1Q9CQ70 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1Q9CQ70 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
H2afb1Q9CQ70 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb1Q9CQ70 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Gm4799-201ENSMUST00000095396 657 ntBASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms