Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2afb1Q9CQ70 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2afb1Q9CQ70 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.54■□□□□ 0.56
H2afb1Q9CQ70 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.53■□□□□ 0.56
H2afb1Q9CQ70 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2afb1Q9CQ70 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
H2afb1Q9CQ70 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2afb1Q9CQ70 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2afb1Q9CQ70 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb1Q9CQ70 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2afb1Q9CQ70 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2afb1Q9CQ70 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2afb1Q9CQ70 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2afb1Q9CQ70 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2afb1Q9CQ70 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
H2afb1Q9CQ70 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2afb1Q9CQ70 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
H2afb1Q9CQ70 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
H2afb1Q9CQ70 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1Q9CQ70 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2afb1Q9CQ70 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
H2afb1Q9CQ70 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2afb1Q9CQ70 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
H2afb1Q9CQ70 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
H2afb1Q9CQ70 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.39■□□□□ 0.53
H2afb1Q9CQ70 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Gm4799-201ENSMUST00000095396 657 ntBASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2afb1Q9CQ70 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2afb1Q9CQ70 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms