Protein–RNA interactions for Protein: Q9CQ48

Nudcd2, NudC domain-containing protein 2, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd2Q9CQ48 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nudcd2Q9CQ48 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nudcd2Q9CQ48 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nudcd2Q9CQ48 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd2Q9CQ48 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nudcd2Q9CQ48 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nudcd2Q9CQ48 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.43■□□□□ 0.7
Nudcd2Q9CQ48 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nudcd2Q9CQ48 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd2Q9CQ48 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nudcd2Q9CQ48 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nudcd2Q9CQ48 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd2Q9CQ48 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd2Q9CQ48 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd2Q9CQ48 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd2Q9CQ48 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nudcd2Q9CQ48 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nudcd2Q9CQ48 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nudcd2Q9CQ48 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Nudcd2Q9CQ48 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.38■□□□□ 0.69
Nudcd2Q9CQ48 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd2Q9CQ48 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd2Q9CQ48 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nudcd2Q9CQ48 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nudcd2Q9CQ48 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nudcd2Q9CQ48 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Nudcd2Q9CQ48 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nudcd2Q9CQ48 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nudcd2Q9CQ48 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nudcd2Q9CQ48 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Nudcd2Q9CQ48 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nudcd2Q9CQ48 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nudcd2Q9CQ48 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nudcd2Q9CQ48 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nudcd2Q9CQ48 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
Nudcd2Q9CQ48 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd2Q9CQ48 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd2Q9CQ48 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd2Q9CQ48 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd2Q9CQ48 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nudcd2Q9CQ48 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nudcd2Q9CQ48 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Nudcd2Q9CQ48 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nudcd2Q9CQ48 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms