Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Msh4Q99MT2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.96■■□□□ 1.11
Msh4Q99MT2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.96■■□□□ 1.11
Msh4Q99MT2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh4Q99MT2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Msh4Q99MT2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.95■■□□□ 1.1
Msh4Q99MT2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Msh4Q99MT2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Msh4Q99MT2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.95■■□□□ 1.1
Msh4Q99MT2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Msh4Q99MT2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh4Q99MT2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.94■■□□□ 1.1
Msh4Q99MT2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Msh4Q99MT2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.94■■□□□ 1.1
Msh4Q99MT2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.94■■□□□ 1.1
Msh4Q99MT2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh4Q99MT2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.94■■□□□ 1.1
Msh4Q99MT2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Msh4Q99MT2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh4Q99MT2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh4Q99MT2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Msh4Q99MT2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Msh4Q99MT2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh4Q99MT2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh4Q99MT2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Msh4Q99MT2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Msh4Q99MT2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh4Q99MT2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh4Q99MT2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Msh4Q99MT2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.89■■□□□ 1.09
Msh4Q99MT2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Msh4Q99MT2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh4Q99MT2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh4Q99MT2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Msh4Q99MT2 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.88■■□□□ 1.09
Msh4Q99MT2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Msh4Q99MT2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.87■■□□□ 1.09
Msh4Q99MT2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Msh4Q99MT2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.87■■□□□ 1.09
Msh4Q99MT2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.87■■□□□ 1.09
Msh4Q99MT2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh4Q99MT2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh4Q99MT2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Msh4Q99MT2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.86■■□□□ 1.09
Msh4Q99MT2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Msh4Q99MT2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Msh4Q99MT2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh4Q99MT2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Msh4Q99MT2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.84■■□□□ 1.09
Msh4Q99MT2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Msh4Q99MT2 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.84■■□□□ 1.09
Msh4Q99MT2 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.84■■□□□ 1.09
Msh4Q99MT2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Msh4Q99MT2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh4Q99MT2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Msh4Q99MT2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Msh4Q99MT2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Msh4Q99MT2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Msh4Q99MT2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Msh4Q99MT2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Msh4Q99MT2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.82■■□□□ 1.08
Msh4Q99MT2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh4Q99MT2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh4Q99MT2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Msh4Q99MT2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.81■■□□□ 1.08
Msh4Q99MT2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.81■■□□□ 1.08
Msh4Q99MT2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Msh4Q99MT2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Msh4Q99MT2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh4Q99MT2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh4Q99MT2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Msh4Q99MT2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Msh4Q99MT2 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh4Q99MT2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Msh4Q99MT2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Msh4Q99MT2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh4Q99MT2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Msh4Q99MT2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh4Q99MT2 Mir6538-201ENSMUST00000183713 110 ntBASIC21.77■■□□□ 1.08
Msh4Q99MT2 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh4Q99MT2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Msh4Q99MT2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Msh4Q99MT2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Msh4Q99MT2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Msh4Q99MT2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Msh4Q99MT2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.75■■□□□ 1.07
Msh4Q99MT2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms