Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.85■■□□□ 1.25
Cstf1Q99LC2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cstf1Q99LC2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.84■■□□□ 1.25
Cstf1Q99LC2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Cstf1Q99LC2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf1Q99LC2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Cstf1Q99LC2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Gm45102-201ENSMUST00000207427 857 ntBASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf1Q99LC2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Gm13238-201ENSMUST00000117655 780 ntBASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Cstf1Q99LC2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Gm44428-201ENSMUST00000204474 874 ntBASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cstf1Q99LC2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf1Q99LC2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Gm43566-201ENSMUST00000196851 808 ntBASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cstf1Q99LC2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf1Q99LC2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.77■■□□□ 1.24
Cstf1Q99LC2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.77■■□□□ 1.24
Cstf1Q99LC2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf1Q99LC2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.77■■□□□ 1.24
Cstf1Q99LC2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
Cstf1Q99LC2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf1Q99LC2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf1Q99LC2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf1Q99LC2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf1Q99LC2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Cstf1Q99LC2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cstf1Q99LC2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.74■■□□□ 1.23
Cstf1Q99LC2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf1Q99LC2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf1Q99LC2 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.72■■□□□ 1.23
Cstf1Q99LC2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cstf1Q99LC2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Cstf1Q99LC2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf1Q99LC2 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.71■■□□□ 1.23
Cstf1Q99LC2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cstf1Q99LC2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cstf1Q99LC2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.7■■□□□ 1.22
Cstf1Q99LC2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Cstf1Q99LC2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cstf1Q99LC2 Amer2-203ENSMUST00000225247 2662 ntBASIC22.7■■□□□ 1.22
Cstf1Q99LC2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Gm45444-201ENSMUST00000211394 898 ntBASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cstf1Q99LC2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cstf1Q99LC2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cstf1Q99LC2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cstf1Q99LC2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cstf1Q99LC2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cstf1Q99LC2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.66■■□□□ 1.22
Cstf1Q99LC2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cstf1Q99LC2 Gm9959-201ENSMUST00000068277 390 ntBASIC22.66■■□□□ 1.22
Cstf1Q99LC2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cstf1Q99LC2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cstf1Q99LC2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cstf1Q99LC2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cstf1Q99LC2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms