Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha8Q91Y12 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Pcdha8Q91Y12 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Pcdha8Q91Y12 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha8Q91Y12 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha8Q91Y12 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.99■■□□□ 1.11
Pcdha8Q91Y12 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
Pcdha8Q91Y12 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha8Q91Y12 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha8Q91Y12 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha8Q91Y12 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha8Q91Y12 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha8Q91Y12 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdha8Q91Y12 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.95■■□□□ 1.1
Pcdha8Q91Y12 Gm4799-201ENSMUST00000095396 657 ntBASIC21.95■■□□□ 1.1
Pcdha8Q91Y12 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha8Q91Y12 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha8Q91Y12 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha8Q91Y12 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pcdha8Q91Y12 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.93■■□□□ 1.1
Pcdha8Q91Y12 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha8Q91Y12 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdha8Q91Y12 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.92■■□□□ 1.1
Pcdha8Q91Y12 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdha8Q91Y12 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.92■■□□□ 1.1
Pcdha8Q91Y12 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
Pcdha8Q91Y12 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.9■■□□□ 1.1
Pcdha8Q91Y12 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha8Q91Y12 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha8Q91Y12 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Pcdha8Q91Y12 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha8Q91Y12 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Pcdha8Q91Y12 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha8Q91Y12 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pcdha8Q91Y12 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha8Q91Y12 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha8Q91Y12 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha8Q91Y12 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Pcdha8Q91Y12 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdha8Q91Y12 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 Mir3960-201ENSMUST00000198213 73 ntBASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.85■■□□□ 1.09
Pcdha8Q91Y12 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha8Q91Y12 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha8Q91Y12 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdha8Q91Y12 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdha8Q91Y12 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdha8Q91Y12 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha8Q91Y12 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha8Q91Y12 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdha8Q91Y12 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdha8Q91Y12 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdha8Q91Y12 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha8Q91Y12 Gm9812-201ENSMUST00000061934 968 ntBASIC21.79■■□□□ 1.08
Pcdha8Q91Y12 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha8Q91Y12 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha8Q91Y12 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdha8Q91Y12 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha8Q91Y12 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdha8Q91Y12 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms