Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.9■■□□□ 1.42
Pcdhb18Q91Y02 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb18Q91Y02 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb18Q91Y02 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.89■■□□□ 1.41
Pcdhb18Q91Y02 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.88■■□□□ 1.41
Pcdhb18Q91Y02 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb18Q91Y02 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb18Q91Y02 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.87■■□□□ 1.41
Pcdhb18Q91Y02 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb18Q91Y02 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb18Q91Y02 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb18Q91Y02 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Pcdhb18Q91Y02 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb18Q91Y02 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb18Q91Y02 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb18Q91Y02 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb18Q91Y02 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb18Q91Y02 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdhb18Q91Y02 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb18Q91Y02 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb18Q91Y02 Gm10420-201ENSMUST00000121713 882 ntBASIC23.83■■□□□ 1.41
Pcdhb18Q91Y02 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb18Q91Y02 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.83■■□□□ 1.41
Pcdhb18Q91Y02 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhb18Q91Y02 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb18Q91Y02 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdhb18Q91Y02 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb18Q91Y02 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb18Q91Y02 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb18Q91Y02 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdhb18Q91Y02 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb18Q91Y02 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb18Q91Y02 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Pcdhb18Q91Y02 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb18Q91Y02 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb18Q91Y02 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb18Q91Y02 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhb18Q91Y02 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb18Q91Y02 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb18Q91Y02 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb18Q91Y02 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb18Q91Y02 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb18Q91Y02 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhb18Q91Y02 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb18Q91Y02 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb18Q91Y02 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb18Q91Y02 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb18Q91Y02 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb18Q91Y02 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb18Q91Y02 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb18Q91Y02 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb18Q91Y02 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.75■■□□□ 1.39
Pcdhb18Q91Y02 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb18Q91Y02 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb18Q91Y02 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb18Q91Y02 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Pcdhb18Q91Y02 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb18Q91Y02 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb18Q91Y02 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb18Q91Y02 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pcdhb18Q91Y02 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhb18Q91Y02 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Pcdhb18Q91Y02 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb18Q91Y02 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb18Q91Y02 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb18Q91Y02 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
Pcdhb18Q91Y02 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb18Q91Y02 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Gm44428-201ENSMUST00000204474 874 ntBASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Gm5921-201ENSMUST00000075898 882 ntBASIC23.68■■□□□ 1.38
Pcdhb18Q91Y02 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdhb18Q91Y02 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb18Q91Y02 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhb18Q91Y02 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhb18Q91Y02 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdhb18Q91Y02 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb18Q91Y02 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pcdhb18Q91Y02 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb18Q91Y02 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb18Q91Y02 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb18Q91Y02 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms