Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdhb20Q91XZ9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb20Q91XZ9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb20Q91XZ9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdhb20Q91XZ9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.81■■□□□ 1.08
Pcdhb20Q91XZ9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdhb20Q91XZ9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb20Q91XZ9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Cap2-205ENSMUST00000225824 1634 ntBASIC21.8■■□□□ 1.08
Pcdhb20Q91XZ9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb20Q91XZ9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb20Q91XZ9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb20Q91XZ9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb20Q91XZ9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb20Q91XZ9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb20Q91XZ9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb20Q91XZ9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.77■■□□□ 1.08
Pcdhb20Q91XZ9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Pcdhb20Q91XZ9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb20Q91XZ9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb20Q91XZ9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb20Q91XZ9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdhb20Q91XZ9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb20Q91XZ9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdhb20Q91XZ9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb20Q91XZ9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb20Q91XZ9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb20Q91XZ9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb20Q91XZ9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb20Q91XZ9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.69■■□□□ 1.06
Pcdhb20Q91XZ9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb20Q91XZ9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb20Q91XZ9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb20Q91XZ9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb20Q91XZ9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb20Q91XZ9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb20Q91XZ9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Pcdhb20Q91XZ9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb20Q91XZ9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Pcdhb20Q91XZ9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb20Q91XZ9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb20Q91XZ9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms