Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
StrcQ8VIM6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
StrcQ8VIM6 Gm45444-201ENSMUST00000211394 898 ntBASIC28.47■■■□□ 2.15
StrcQ8VIM6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.46■■■□□ 2.15
StrcQ8VIM6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
StrcQ8VIM6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.46■■■□□ 2.15
StrcQ8VIM6 Rps24-207ENSMUST00000224568 714 ntBASIC28.45■■■□□ 2.14
StrcQ8VIM6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.45■■■□□ 2.14
StrcQ8VIM6 Gm43592-201ENSMUST00000196922 1165 ntBASIC28.44■■■□□ 2.14
StrcQ8VIM6 Gm44428-201ENSMUST00000204474 874 ntBASIC28.44■■■□□ 2.14
StrcQ8VIM6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
StrcQ8VIM6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
StrcQ8VIM6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
StrcQ8VIM6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
StrcQ8VIM6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
StrcQ8VIM6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
StrcQ8VIM6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
StrcQ8VIM6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
StrcQ8VIM6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
StrcQ8VIM6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
StrcQ8VIM6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
StrcQ8VIM6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
StrcQ8VIM6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
StrcQ8VIM6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
StrcQ8VIM6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
StrcQ8VIM6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
StrcQ8VIM6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
StrcQ8VIM6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.38■■■□□ 2.13
StrcQ8VIM6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.37■■■□□ 2.13
StrcQ8VIM6 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.36■■■□□ 2.13
StrcQ8VIM6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
StrcQ8VIM6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
StrcQ8VIM6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
StrcQ8VIM6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
StrcQ8VIM6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC28.34■■■□□ 2.13
StrcQ8VIM6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
StrcQ8VIM6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.34■■■□□ 2.13
StrcQ8VIM6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
StrcQ8VIM6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
StrcQ8VIM6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
StrcQ8VIM6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
StrcQ8VIM6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
StrcQ8VIM6 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
StrcQ8VIM6 Gm45102-201ENSMUST00000207427 857 ntBASIC28.31■■■□□ 2.12
StrcQ8VIM6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
StrcQ8VIM6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC28.3■■■□□ 2.12
StrcQ8VIM6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
StrcQ8VIM6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
StrcQ8VIM6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.28■■■□□ 2.12
StrcQ8VIM6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
StrcQ8VIM6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.28■■■□□ 2.12
StrcQ8VIM6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
StrcQ8VIM6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
StrcQ8VIM6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.26■■■□□ 2.11
StrcQ8VIM6 Nsd1-203ENSMUST00000224156 1149 ntBASIC28.26■■■□□ 2.11
StrcQ8VIM6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
StrcQ8VIM6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC28.25■■■□□ 2.11
StrcQ8VIM6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
StrcQ8VIM6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
StrcQ8VIM6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.23■■■□□ 2.11
StrcQ8VIM6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
StrcQ8VIM6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
StrcQ8VIM6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
StrcQ8VIM6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
StrcQ8VIM6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
StrcQ8VIM6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
StrcQ8VIM6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
StrcQ8VIM6 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC28.2■■■□□ 2.11
StrcQ8VIM6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
StrcQ8VIM6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.11
StrcQ8VIM6 Gm9959-201ENSMUST00000068277 390 ntBASIC28.2■■■□□ 2.1
StrcQ8VIM6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
StrcQ8VIM6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
StrcQ8VIM6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
StrcQ8VIM6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
StrcQ8VIM6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
StrcQ8VIM6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
StrcQ8VIM6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
StrcQ8VIM6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
StrcQ8VIM6 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.15■■■□□ 2.1
StrcQ8VIM6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
StrcQ8VIM6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
StrcQ8VIM6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
StrcQ8VIM6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
StrcQ8VIM6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
StrcQ8VIM6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
StrcQ8VIM6 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
StrcQ8VIM6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
StrcQ8VIM6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
StrcQ8VIM6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
StrcQ8VIM6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
StrcQ8VIM6 Zxda-201ENSMUST00000117281 2621 ntBASIC28.12■■■□□ 2.09
StrcQ8VIM6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC28.11■■■□□ 2.09
StrcQ8VIM6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.11■■■□□ 2.09
StrcQ8VIM6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms