Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
H1fooQ8VIK3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H1fooQ8VIK3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H1fooQ8VIK3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H1fooQ8VIK3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H1fooQ8VIK3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
H1fooQ8VIK3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
H1fooQ8VIK3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
H1fooQ8VIK3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H1fooQ8VIK3 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.91■□□□□ 0.62
H1fooQ8VIK3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H1fooQ8VIK3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
H1fooQ8VIK3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.9■□□□□ 0.62
H1fooQ8VIK3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
H1fooQ8VIK3 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.89■□□□□ 0.61
H1fooQ8VIK3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H1fooQ8VIK3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
H1fooQ8VIK3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H1fooQ8VIK3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
H1fooQ8VIK3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.87■□□□□ 0.61
H1fooQ8VIK3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H1fooQ8VIK3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Gm7432-201ENSMUST00000210343 879 ntBASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
H1fooQ8VIK3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
H1fooQ8VIK3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
H1fooQ8VIK3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H1fooQ8VIK3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H1fooQ8VIK3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
H1fooQ8VIK3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.83■□□□□ 0.61
H1fooQ8VIK3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
H1fooQ8VIK3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
H1fooQ8VIK3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H1fooQ8VIK3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
H1fooQ8VIK3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H1fooQ8VIK3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.82■□□□□ 0.6
H1fooQ8VIK3 Gm4799-201ENSMUST00000095396 657 ntBASIC18.82■□□□□ 0.6
H1fooQ8VIK3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H1fooQ8VIK3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
H1fooQ8VIK3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
H1fooQ8VIK3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
H1fooQ8VIK3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
H1fooQ8VIK3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H1fooQ8VIK3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H1fooQ8VIK3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Gm11599-201ENSMUST00000118720 878 ntBASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.78■□□□□ 0.6
H1fooQ8VIK3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H1fooQ8VIK3 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.77■□□□□ 0.6
H1fooQ8VIK3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.77■□□□□ 0.59
H1fooQ8VIK3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H1fooQ8VIK3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms